Structures A

From Icbwiki

Revision as of 16:55, 29 June 2006; view current revision
←Older revision | Newer revision→
Jump to: navigation, search

The original sequences (Dataset A) were compared to a structural database to create a set of structures that contain a CYS residue that is known to be S-nitrosylated.

Some sequences found in the original dataset contained more than one CYS residue, and do not appear in this positive data set.

Q6P9V9,1Z2B,C,376,+1,365,1Z2BC,1SA1C,1IA0A,1TVKA,T,RAVCMLSNTTAIAEAWARL
Q6P9V9,1Z2B,C,347,+1,336,1Z2BC,1SA1C,1IA0A,1TVKA,T,RSIQFVDWCPTGFKV
P69897,1SA1,D,241,+1,237,1SA1D,1TVKB,1Z2BD,1Z2BC,T,KLTTPTYGDLNHLVSATMSGVTTCLRF
P69897,1SA1,D,305,+1,301,1SA1D,1TVKB,1Z2BD,1Z2BC,T,KNMMAACDPRH
P69897,1SA1,D,356,+1,352,1SA1D,1TVKB,1Z2BD,1Z2BC,T,KTAVCDIPPRG
Q05962,2C3E,A,159,+1,158,2C3EA,T,REFNGLGDCLTKI
Q05962,2C3E,A,256,+1,255,2C3EA,T,KGADIMYTGTVDCWRK
P04797,1U8F,R,247,+1,244,1U8FR,1ZNQQ,1J0XR,3GPDG,T,RVPTPNVSVVDLTCRL
Q9D6M3,1OKC,A,256,+1,254,1OKCA,T,RGVNEDTYSGFLDCARK
P11980,1F3W,H,357,+1,345,1F3WH,1PKM_,1AQFH,1F3XH,T,RAEGSDVANAVLDGADCIMLSGETAKG *
P14152,5MDH,B,136,+1,135,5MDHB,4MDHB,1BMDB,2CVQB,T,KVIVVGNPANTNCLTASKS
P07335,1G0W,A,283,+1,281,1G0WA,1QH4D,2CRKA,1I0ED,T,KNYEFMWNPHLGYILTCPSNLGTGLRA
P09605,1CRK,D,278,+1,277,1CRKD,1QK1H,1G0WA,1U6RB,T,RLGYILTCPSNLGTGLRA
P11442,1XI5,I,870,+1,869,1XI5I,1BPOC,1B89A,1UTCB,T,RIHEGCEEPATHNALAKI
P28663,1QQE,A,208,+1,207,1QQEA,T,KADPQEAINCLNAAIDIYTDMGRF
P61765,1DN1,A,110,+1,106,1DN1A,1FVHA,1EPUA,,T,RAAHVFFTDSCPDALFNELVKS
P47809,1S9I,B,211,+1,152,1S9IB,1S9JA,1YHVA,1YHWA,T,KLCDFGISGQLVDSIAKT *
P21708,1TVO,A,161,+1,153,1TVOA,4ERK_,1GOL_,2ERK_,T,RDLKPSNLLINTTCDLKI *
P30033,1CIP,A,139,+1,107,1CIPA,1SVSA,1GIT_,1GIL_,T,RLWGDSGIQECFNRS *
P63329,1AUI,A,228,+1,214,1AUIA,1TCOA,1MF8A,1M63E,T,RFKEPPAYGPMCDILWSDPLEDFGNEKT *
Q9QUR7,1NMV,A,113,+1,112,1NMVA,1F8AB,1NMWA,1YW5A,T,KSGEEDFESLASQFSDCSSAKA
Q02293,1TN8,B,799,+1,282,1TN8B,1O1TB,1TN6B,1N9AB,T,KLVDGCYSFWQAGLLPLLHRA *
P04906,1GSY,B,47,+1,46,1GSYB,1BAYB,1GTIF,2PGTB,T,KSTCLYGQLPKF
Q07009,1KFU,L,301,+1,299,1DF0A,1U5IA,1KFUL,1QXPB,T,KWNDNCPSWNTVDPEVRA
Personal tools