Elementolab/Formats

From Icbwiki

• Wiggle http://genome.ucsc.edu/goldenPath/help/wiggle.html

Notes: wiggle track coordinates are 1-based.

• BigWig http://genome.ucsc.edu/goldenPath/help/bigWig.html
• GMOD tracks http://plasmodb.org/cgi-bin/gbrowse/plasmodb/?help=annotation
• BAM/SAM

tags
NM = edit distance, eg NM:i:3 
NH = next hit eg NH:i:3
CC = chr for next hit, eg CC:Z:chr15
CP = pos for next hit, eg CP:i:100331990