Elementolab/Personal Medicine Pipeline

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  • mutation analysis 
perl /home/ole2001/PROGRAMS/SNPseeqer/SCRIPTS/RNAseq_addMD_split_SNVseeqer.pl --dirs=001,002 --submit=1
  • fusion analysis

To summarize multiple fusion analyses 

perl ~/PROGRAMS/SNPseeqer/SCRIPTS/TopHatFusion_summarize_filter.pl
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