Elementolab/2012 CSHL
From Icbwiki
(Difference between revisions)
| Revision as of 16:36, 3 July 2012 Eug2002 (Talk | contribs) ← Previous diff |
Revision as of 16:37, 3 July 2012 Eug2002 (Talk | contribs) Next diff → |
||
| Line 14: | Line 14: | ||
| * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/High-throughput-Seq.pdf PDF version of the vignette] | * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/High-throughput-Seq.pdf PDF version of the vignette] | ||
| * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/High-throughput-Seq.R The R code extracted from the vignette (good for cut-and-paste)] | * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/High-throughput-Seq.R The R code extracted from the vignette (good for cut-and-paste)] | ||
| + | |||
| + | Data: | ||
| + | * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/data.zip Data.zip (~1.0G)] | ||
| ==Part 2: ChIP-seq analysis == | ==Part 2: ChIP-seq analysis == | ||
| Line 22: | Line 25: | ||
| * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/ChIP-seq.pdf PDF version of the vignette] | * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/ChIP-seq.pdf PDF version of the vignette] | ||
| * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/ChIP-seq.R The R code extracted from the vignette (good for cut-and-paste)] | * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/ChIP-seq.R The R code extracted from the vignette (good for cut-and-paste)] | ||
| + | |||
| + | Data: | ||
| + | * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/data2.zip Data2.zip (~1.0G)] | ||
| ==Part 3: ENCODE project intoduction == | ==Part 3: ENCODE project intoduction == | ||
| Lecture: | Lecture: | ||
| * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/CSHL-ENCODE-2012.pdf Slides of the talk] | * [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/CSHL-ENCODE-2012.pdf Slides of the talk] | ||
| - | |||
| - | |||
| - | The data needed for the labs are available at ... | ||
Revision as of 16:37, 3 July 2012
Back to R tutorial
Back to Elementolab/
Contents |
2012 CSHL Summer course: Statistical Analysis for Genome Scale Data
Here are the lectures and lab vignettes for the 2012 CSHL summer course where Olivier and Jenny participated.
Part 1: Basics of high-throughput sequencing
Lecture:
Lab:
Data:
Part 2: ChIP-seq analysis
Lecture:
Lab:
Data:
Part 3: ENCODE project intoduction
Lecture:
