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	Lecture:		Lecture:
	*[http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/CSHL-basic-HTS-2012.pptx Slides of the talk]		*[http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/CSHL-basic-HTS-2012.pptx Slides of the talk]
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	Lab:		Lab:
		+	* [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/High-throughput-Seq.pdf PDF version of the vignette]
		+	* [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/High-throughput-Seq.R The R code extracted from the vignette (good for cut-and-paste)]
	==Part 2: ChIP-seq analysis ==		==Part 2: ChIP-seq analysis ==
	Lecture:		Lecture:
		+	* [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/CSHL-ChIPseq-2012.pptx Slides of the talk]
	Lab:		Lab:
		+	* [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/ChIP-seq.pdf PDF version of the vignette]
		+	* [http://physiology.med.cornell.edu/faculty/elemento/lab/R/CSHL_2012/ChIP-seq.R The R code extracted from the vignette (good for cut-and-paste)]
	The data needed for the labs are available at ...		The data needed for the labs are available at ...

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Revision as of 16:34, 3 July 2012

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Back to Elementolab/

2012 CSHL Summer course: Statistical Analysis for Genome Scale Data

Here are the lectures and lab vignettes for the 2012 CSHL summer course where Olivier and Jenny participated.

Part 1: Basics of high-throughput sequencing

Lecture:

• Slides of the talk

Lab:

• PDF version of the vignette
• The R code extracted from the vignette (good for cut-and-paste)

Part 2: ChIP-seq analysis

Lecture:

• Slides of the talk

Lab:

• PDF version of the vignette
• The R code extracted from the vignette (good for cut-and-paste)

The data needed for the labs are available at ...