BDVAL/Leave-one-out
From Icbwiki
This mode is used to evaluate performance by a "leave one out" cross validation approach. It is implemented by org.bdval.LeaveOneOutMode.
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Mode Parameters
The following options are available in this mode
| Flag | Arguments | Required | Description |
|---|---|---|---|
| --label | label | yes | A string that the type of model construction process used to generate the models. |
| (-f | --folds) | folds | yes | Number of cross validation folds. |
| --cv-repeats | cv-repeats | no | Number of cross validation repeats. default = 1 (does one round of cross-validation). Values larger than one cause the cross validation to be repeated and results averaged over the rounds. |
| --submission-file | submission-file | no | The MAQC-II submission file to create. Please note that this file lacks some columns required for MAQC-II submission. These columns must be created manually in excel. |
| --feature-selection-method | feature-selection-method | no | This option is deprecated. The feature selection method will be determined automatically from the label provided. |
| --binary | binary | no | Indicates that binary decision values (-1/+1) should be used to evaluate the binary flavor of evaluation measures in addition to the traditional evaluation measures. (default: false) |
