institute for computational biomedicine: Microarray Resources

Resource Center > Microarray Resources

The ICB now offers a consulting service to assist Cornell faculty with microarray data analysis. The objectives of this service are to:

Help determine and develop pertinent tools and methods to facilitate ongoing research projects

Assist in the effective implementation of these microarray analysis resources

Offer individualized training in microarray analysis models and software for incorporation into ongoing research projects.

For further information about consulting services at the ICB please visit our list of frequently asked questions [FAQ].

The Computational Genomics Core Facility (CGCF) at Cornell also offers access to microarray data analysis related software access subscription.

This area is dedicated to facilitating microarray research related data analysis needs. New resources offered by the Institute or external sources are quickly introduced and links to further information are available for readers interested in a particular topic.

Free Academic Resources

Commercial Resources

Microarray Analysis Related References

[Note: A list of MIAME (Minimum information about a microarray experiment) compliant software can be found here.

The ICB also offers microarray analysis related tutorials and workshops in conjunction with the computational biology center at Sloan Kettering Research Institute. Please go to http://www.trii.org for details.

News

Jul, 2009; ChIPseeqer, a comprehensive framework for analysis of ChIP-seq data developed in the Elemento lab, is now available for download. [More]
Apr, 2009; The BDVal program developed by the Campagne laboratory for MAQC-II is now available from http://bdval.org. The software supports the development and evaluation of predictive biomarker models from high-throughput data. The web site offers binary and source distributions. [More]
Jan, 2009; Twease now supports searching MEDLINE articles by Author, Journal, and Publication Year. Examples for performing these searches can be found in the updated Twease tutorial. [More]

[News Archives] [Mailing List]

Events

Dec 11th; 4:00pm-5:00pm: Institute for Computational Biomedicine Research in Progress Seminar Series - Fabien Campagne; ICB Conference Room - Y.1301
Jan 15th; 4:00pm-5:00pm: Institute for Computational Biomedicine Research in Progress Seminar Series - Lei Shi; ICB Conference Room - Y.1301
Feb 12th; 4:00pm-5:00pm: Institute for Computational Biomedicine Research in Progress Seminar Series - Christopher E. Mason; ICB Conference Room - Y.1301
Mar 12th; 4:00pm-5:00pm: Institute for Computational Biomedicine Research in Progress Seminar Series - Olivier Elemento; ICB Conference Room - Y.1301
Apr 9th; 4:00pm-5:00pm: Institute for Computational Biomedicine Research in Progress Seminar Series - Emre Aksay; ICB Conference Room - Y.1301
May 14th; 4:00pm-5:00pm: Institute for Computational Biomedicine Research in Progress Seminar Series - Jonathan D. Victor; ICB Conference Room - Y.1301
Jun 11th; 4:00pm-5:00pm: Institute for Computational Biomedicine Research in Progress Seminar Series - Harel Weinstein; ICB Conference Room - Y.1301
Jul 9th; 4:00pm-5:00pm: Institute for Computational Biomedicine Research in Progress Seminar Series - Duane Hassane; ICB Conference Room - Y.1301

Microarray links

Microarray Gene Expression Data (MGED) Society

Minimum information about a microarray experiment - MIAME

CAMDA: Critical Assessment of Microarray Data Analysis

EBI Microarray Page

Stanford Microarray Database

NCBI Microarray Introductory Primer

NCI Microarray Center

Lab-on-a-chip.com