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 | [ description ] |
High Throughput identification of tissue expression profiles and specificity.
| [ about the method ] |
Skrabanek L and Campagne F. TissueInfo: high-throughput identification of tissue expression profiles and specificity. Nucleic Acids Res. 2001 29(21):e102
[PubMed]
[Full Text]
[Supplementary Material]
Campagne F and Skrabanek L. Mining expressed sequence tags identifies cancer markers of clinical interest. BMC Bioinformatics. 2006 Nov 1;7:481.
[PubMed]
[Full Text]
[Supplementary Material]
TissueInfo has been cited many times in the literature.
| [ documentation ] |
Visit the following tutorials and learn how to predict the tissue expression
profile and specificity for:
The following manual pages are available:
A recent development of Tissueinfo can perform tissue expression profile similarity searches (TEPSS):
 | [ availability ] |
TissueInfo source code and data files are available at: [TissueInfo Distribution]
TissueInfo is also available as a webservice at: [TissueInfo Database Service]
The source code, datafiles, and gene lists for the cancer biomarker study can be found at: [Tissueinfo Cancer Evaluation]
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March, 2012; Michelle Sahai, Ph.D., a Postdoctoral Associate in Harel Weinstein's lab, was awarded a three year Canadian Institutes of Health Research (CIHR) Fellowship for her research on Molecular Mechanisms of the Dopamine Transporter Function: The effects of drugs of abuse.
Feb, 2012; Sayan Mondal, a student in Harel Weinstein's lab, won the Student Research Achievement Award at the Biophysical Society's 2012 Annual Meeting for his poster on the interaction of GPCRs with the membrane.
Jan, 2012; Jan Dlabal, a student from the Lycée Français de New York, was selected as a semi-finalist in the 2012 Intel Science Talent Search, for work on the determination of large-scale genomic structure performed in the lab of Olivier Elemento.
Oct, 2011; Sheila Nirenberg presented a talk, "Can we speak the language of the brain?", at the TEDMED 2011 conference.
A Q & A session followed.
Nov, 2011; GobyWeb binary release. The Campagne laboratory has just released a binary distribution of GobyWeb. This first public release of GobyWeb makes it possible to install the tool locally for non-commercial use. Detailled installation instructions are available on the download page.
Apr, 2011; Dr. Olivier Elemento was awarded an NSF CAREER Grant, the National Science Foundation's most prestigious award in support of junior faculty who exemplify the role of teacher-scholars through outstanding research, excellent education and the integration of education and research.
Nov, 2010; Dr. Sheila Nirenberg's work on artificial retinas has been featured in Technology Review, Wired, Scientific American, and the New Scientist.
Jul, 2009; ChIPseeqer, a comprehensive framework for analysis of ChIP-seq data developed in the Elemento lab, is now available for download. [More]
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