SigPath features ::institute for computational biomedicine

CRT home > XML Submission Notes

You can use either spids or accession numbers to identify the molecules that make up your complex.
In the given example for the submission of a complex: the complex "comp1" is made up of two molecules, one identified by accession no. (ac="sw:Q60631") and the other identified by spid (spid="sp119179").

To submit a complex into SigPath you need to submit the reaction that makes the complex.

while submitting a reaction in which a molecule is modified you need to create a modified chemical and reference it in the reaction.

Back to XML Submission details page.

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SigPath News

Jul 25th, 2005; New SigPath beta release [Release info]
Feb 9th, 2005; New SigPath production release [Release info]
Dec 9-11th, 2004; The First SigPath workshop was held in New York City. [Workshop info]
Nov 3rd, 2004; New SigPath beta release [Release info]
Oct 29th, 2004; New SigPath production released [Release info]
Sep 22nd, 2004; New beta release of SigPath available for preview and testing. [Release info]
Sep 3rd, 2004; A description of SigPath is now available in Science STKE. SigPath users may now cite it as Quantitative information management for the biochemical computation of cellular networks. Campagne F, Neves S, Chang CW, Skrabanek L, Ram PT, Iyengar R, Weinstein H. Science STKE 248:PL11. (2004). [SigPath]
Mar 2nd, 2004; A new release of SigPath is now available. [SigPath]
Mar 1st, 2004; SigPath is now released under the GNU General Public License [download source code]

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Events

Aug 25-29, 2008: Stanford University, CA - 7th Annual International Conference on Computational Systems Bioinformatics. Hosted by: Life Sciences Society [More]
Sep 22-26, 2008: Goettingen, Germany - Fall Course on Computational Neuroscience at the Max Planck Institute for Dynamics and Self-Organization. This annual course comprises tutorial lectures and seminar style coverage of selected current topics. Registration deadline: Aug 8, 2008. [More]