org.sigpath.bioimport.sbml
Class Compartment

java.lang.Object
  org.sigpath.bioimport.sbml.SBase
      org.sigpath.bioimport.sbml.Compartment

All Implemented Interfaces:

Serializable

public class Compartment
extends SBase
implements Serializable

Class Compartment.

Version:

$Revision$ $Date$

See Also:

Serialized Form

Constructor Summary

Compartment()

Method Summary

void	deleteConstant() Method deleteConstant
void	deleteSize() Method deleteSize
void	deleteSpatialDimensions() Method deleteSpatialDimensions
boolean	getConstant() Returns the value of field 'constant'.
String	getId() Returns the value of field 'id'.
String	getName() Returns the value of field 'name'.
String	getOutside() Returns the value of field 'outside'.
double	getSize() Returns the value of field 'size'.
int	getSpatialDimensions() Returns the value of field 'spatialDimensions'.
String	getUnits() Returns the value of field 'units'.
boolean	hasConstant() Method hasConstant
boolean	hasSize() Method hasSize
boolean	hasSpatialDimensions() Method hasSpatialDimensions
boolean	isValid() Method isValid
void	marshal(ContentHandler handler) Method marshal
void	marshal(Writer out) Method marshal
void	setConstant(boolean constant) Sets the value of field 'constant'.
void	setId(String id) Sets the value of field 'id'.
void	setName(String name) Sets the value of field 'name'.
void	setOutside(String outside) Sets the value of field 'outside'.
void	setSize(double size) Sets the value of field 'size'.
void	setSpatialDimensions(int spatialDimensions) Sets the value of field 'spatialDimensions'.
void	setUnits(String units) Sets the value of field 'units'.
static SBase	unmarshal(Reader reader) Method unmarshal
void	validate() Method validate

Methods inherited from class org.sigpath.bioimport.sbml.SBase

getAnnotation, getMetaid, getNotes, setAnnotation, setMetaid, setNotes

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Compartment

public Compartment()

Method Detail

deleteConstant

public void deleteConstant()

Method deleteConstant

deleteSize

public void deleteSize()

Method deleteSize

deleteSpatialDimensions

public void deleteSpatialDimensions()

Method deleteSpatialDimensions

getConstant

public boolean getConstant()

Returns the value of field 'constant'.

Returns:

boolean

getId

public String getId()

Returns the value of field 'id'.

Returns:

String

getName

public String getName()

Returns the value of field 'name'.

Returns:

String

getOutside

public String getOutside()

Returns the value of field 'outside'.

Returns:

String

getSize

public double getSize()

Returns the value of field 'size'.

Returns:

double

getSpatialDimensions

public int getSpatialDimensions()

Returns the value of field 'spatialDimensions'.

Returns:

int

getUnits

public String getUnits()

Returns the value of field 'units'.

Returns:

String

hasConstant

public boolean hasConstant()

Method hasConstant

Returns:

boolean

hasSize

public boolean hasSize()

Method hasSize

Returns:

boolean

hasSpatialDimensions

public boolean hasSpatialDimensions()

Method hasSpatialDimensions

Returns:

boolean

isValid

public boolean isValid()

Method isValid

Overrides:

isValid in class SBase

Returns:

boolean

marshal

public void marshal(Writer out)
             throws MarshalException,
                    ValidationException

Method marshal

Parameters:

out -

Throws:

MarshalException

ValidationException

marshal

public void marshal(ContentHandler handler)
             throws IOException,
                    MarshalException,
                    ValidationException

Method marshal

Parameters:

handler -

Throws:

IOException

MarshalException

ValidationException

setConstant

public void setConstant(boolean constant)

Sets the value of field 'constant'.

Parameters:

constant - the value of field 'constant'.

setId

public void setId(String id)

Sets the value of field 'id'.

Parameters:

id - the value of field 'id'.

setName

public void setName(String name)

Sets the value of field 'name'.

Parameters:

name - the value of field 'name'.

setOutside

public void setOutside(String outside)

Sets the value of field 'outside'.

Parameters:

outside - the value of field 'outside'.

setSize

public void setSize(double size)

Sets the value of field 'size'.

Parameters:

size - the value of field 'size'.

setSpatialDimensions

public void setSpatialDimensions(int spatialDimensions)

Sets the value of field 'spatialDimensions'.

Parameters:

spatialDimensions - the value of field 'spatialDimensions'.

setUnits

public void setUnits(String units)

Sets the value of field 'units'.

Parameters:

units - the value of field 'units'.

unmarshal

public static SBase unmarshal(Reader reader)
                       throws MarshalException,
                              ValidationException

Method unmarshal

Parameters:

reader -

Returns:

SBase

Throws:

MarshalException

ValidationException

validate

public void validate()
              throws ValidationException

Method validate

Overrides:

validate in class SBase

Throws:

ValidationException