org.sigpath.bioimport.reaction2
Class EnzymaticParameters

java.lang.Object
  org.sigpath.bioimport.reaction2.EnzymaticParameters

All Implemented Interfaces:

Serializable

public class EnzymaticParameters
extends Object
implements Serializable

Groups the parameters of an enzymatic reaction in SigPath

Version:

$Revision$ $Date$

See Also:

Serialized Form

Constructor Summary

EnzymaticParameters()

Method Summary

KBKP	getKBKP() Returns the value of field 'KBKP'.
KMichaelis	getKMichaelis() Returns the value of field 'KMichaelis'.
Kp	getKp() Returns the value of field 'kp'.
VMax_EnzymeConcentration	getVMax_EnzymeConcentration() Returns the value of field 'VMax_EnzymeConcentration'.
VMax	getVMax() Returns the value of field 'VMax'.
boolean	isValid() Method isValid
void	marshal(ContentHandler handler) Method marshal
void	marshal(Writer out) Method marshal
void	setKBKP(KBKP KBKP) Sets the value of field 'KBKP'.
void	setKMichaelis(KMichaelis KMichaelis) Sets the value of field 'KMichaelis'.
void	setKp(Kp kp) Sets the value of field 'kp'.
void	setVMax_EnzymeConcentration(VMax_EnzymeConcentration VMax_EnzymeConcentration) Sets the value of field 'VMax_EnzymeConcentration'.
void	setVMax(VMax VMax) Sets the value of field 'VMax'.
static EnzymaticParameters	unmarshal(Reader reader) Method unmarshal
void	validate() Method validate

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

EnzymaticParameters

public EnzymaticParameters()

Method Detail

getKBKP

public KBKP getKBKP()

Returns the value of field 'KBKP'. The field 'KBKP' has the following description: Defines the KBKP value for an enzymatic reaction

Returns:

KBKP

getKMichaelis

public KMichaelis getKMichaelis()

Returns the value of field 'KMichaelis'. The field 'KMichaelis' has the following description: Defines the KMichaelis value for an enzymatic reaction

Returns:

KMichaelis

getKp

public Kp getKp()

Returns the value of field 'kp'. The field 'kp' has the following description: Defines the Kp (KCat) value for an enzymatic reaction

Returns:

Kp

getVMax

public VMax getVMax()

Returns the value of field 'VMax'. The field 'VMax' has the following description: Defines the Vmax value for an enzymatic reaction

Returns:

VMax

getVMax_EnzymeConcentration

public VMax_EnzymeConcentration getVMax_EnzymeConcentration()

Returns the value of field 'VMax_EnzymeConcentration'. The field 'VMax_EnzymeConcentration' has the following description: The concentration of the enzyme used to measure the value of VMax.

Returns:

VMax_EnzymeConcentration

isValid

public boolean isValid()

Method isValid

Returns:

boolean

marshal

public void marshal(Writer out)
             throws MarshalException,
                    ValidationException

Method marshal

Parameters:

out -

Throws:

MarshalException

ValidationException

marshal

public void marshal(ContentHandler handler)
             throws IOException,
                    MarshalException,
                    ValidationException

Method marshal

Parameters:

handler -

Throws:

IOException

MarshalException

ValidationException

setKBKP

public void setKBKP(KBKP KBKP)

Sets the value of field 'KBKP'. The field 'KBKP' has the following description: Defines the KBKP value for an enzymatic reaction

Parameters:

KBKP - the value of field 'KBKP'.

setKMichaelis

public void setKMichaelis(KMichaelis KMichaelis)

Sets the value of field 'KMichaelis'. The field 'KMichaelis' has the following description: Defines the KMichaelis value for an enzymatic reaction

Parameters:

KMichaelis - the value of field 'KMichaelis'.

setKp

public void setKp(Kp kp)

Sets the value of field 'kp'. The field 'kp' has the following description: Defines the Kp (KCat) value for an enzymatic reaction

Parameters:

kp - the value of field 'kp'.

setVMax

public void setVMax(VMax VMax)

Sets the value of field 'VMax'. The field 'VMax' has the following description: Defines the Vmax value for an enzymatic reaction

Parameters:

VMax - the value of field 'VMax'.

setVMax_EnzymeConcentration

public void setVMax_EnzymeConcentration(VMax_EnzymeConcentration VMax_EnzymeConcentration)

Sets the value of field 'VMax_EnzymeConcentration'. The field 'VMax_EnzymeConcentration' has the following description: The concentration of the enzyme used to measure the value of VMax.

Parameters:

VMax_EnzymeConcentration - the value of field 'VMax_EnzymeConcentration'.

unmarshal

public static EnzymaticParameters unmarshal(Reader reader)
                                     throws MarshalException,
                                            ValidationException

Method unmarshal

Parameters:

reader -

Returns:

EnzymaticParameters

Throws:

MarshalException

ValidationException

validate

public void validate()
              throws ValidationException

Method validate

Throws:

ValidationException