edu.mssm.crover.webapps.dimlib.parsers.xml
Class Protein

java.lang.Object
  |
  +--edu.mssm.crover.webapps.dimlib.parsers.xml.Protein
All Implemented Interfaces:
java.io.Serializable

public class Protein
extends java.lang.Object
implements java.io.Serializable

Version:
$Revision$ $Date$
See Also:
Serialized Form

Constructor Summary
Protein()
           
 
Method Summary
 Dblinks getDblinks()
           
 java.lang.String getFamily()
           
 Mutants getMutants()
           
 java.lang.String getName()
           
 java.lang.String getOrganism()
           
 java.lang.String getSequence()
           
 Snps getSnps()
           
 Tm_Domain getTm_Domain()
           
 boolean isValid()
           
 void marshal(org.xml.sax.DocumentHandler handler)
           
 void marshal(java.io.Writer out)
           
 void setDblinks(Dblinks dblinks)
           
 void setFamily(java.lang.String family)
           
 void setMutants(Mutants mutants)
           
 void setName(java.lang.String name)
           
 void setOrganism(java.lang.String organism)
           
 void setSequence(java.lang.String sequence)
           
 void setSnps(Snps snps)
           
 void setTm_Domain(Tm_Domain tm_Domain)
           
static Protein unmarshal(java.io.Reader reader)
           
 void validate()
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

Protein

public Protein()
Method Detail

getDblinks

public Dblinks getDblinks()

getFamily

public java.lang.String getFamily()

getMutants

public Mutants getMutants()

getName

public java.lang.String getName()

getOrganism

public java.lang.String getOrganism()

getSequence

public java.lang.String getSequence()

getSnps

public Snps getSnps()

getTm_Domain

public Tm_Domain getTm_Domain()

isValid

public boolean isValid()

marshal

public void marshal(java.io.Writer out)
             throws org.exolab.castor.xml.MarshalException,
                    org.exolab.castor.xml.ValidationException
Parameters:
out -
org.exolab.castor.xml.MarshalException
org.exolab.castor.xml.ValidationException

marshal

public void marshal(org.xml.sax.DocumentHandler handler)
             throws org.exolab.castor.xml.MarshalException,
                    org.exolab.castor.xml.ValidationException
Parameters:
handler -
org.exolab.castor.xml.MarshalException
org.exolab.castor.xml.ValidationException

setDblinks

public void setDblinks(Dblinks dblinks)
Parameters:
dblinks -

setFamily

public void setFamily(java.lang.String family)
Parameters:
family -

setMutants

public void setMutants(Mutants mutants)
Parameters:
mutants -

setName

public void setName(java.lang.String name)
Parameters:
name -

setOrganism

public void setOrganism(java.lang.String organism)
Parameters:
organism -

setSequence

public void setSequence(java.lang.String sequence)
Parameters:
sequence -

setSnps

public void setSnps(Snps snps)
Parameters:
snps -

setTm_Domain

public void setTm_Domain(Tm_Domain tm_Domain)
Parameters:
tm_Domain -

unmarshal

public static Protein unmarshal(java.io.Reader reader)
                         throws org.exolab.castor.xml.MarshalException,
                                org.exolab.castor.xml.ValidationException
Parameters:
reader -
org.exolab.castor.xml.MarshalException
org.exolab.castor.xml.ValidationException

validate

public void validate()
              throws org.exolab.castor.xml.ValidationException
org.exolab.castor.xml.ValidationException


Copyright @ 2003 Mount Sinai School of Medicine. All Rights Reserved.