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| Interface Summary | |
| TissueInfo | Provides access to tissue information for sequences. |
| TIWeb | Provides access to tissue information for human mRNA. |
| Class Summary | |
| checkLibrary | |
| CuratedTissue | Storage class for tissue information. |
| DbestParser | Parses dbEST and extract tissue information. |
| DumpTissueInfo | Dumps TissueInfo to files. |
| getCuratedTissue | Reads a file of raw tissues and checks whether a CuratedTissue exists for that raw tissue. |
| getNulls | |
| Hierarchy | This class determines the relationships between tissue classes. |
| HierarchyKeywords | Splits the hierarchy interface names up into keywords. |
| replaceRawTissue | |
| ReportParser | Parses report files from tiquery. |
| tiambiguity | |
| tiimport | |
| timegablast | Converts megablast output type 3 (-D 3) to tiac format. |
| tiquery | |
| tisearch | |
| TissueCuration | |
| TissueDetails | |
| TissueInfo_CacheImpl | Cache TissueInfo in memory. |
| TissueInfo_JDBCImpl | Provides access to tissue information for sequences. |
| TissueInfo_MemoryImpl | Keeps TissueInfo in memory. |
| TissueSelection | Storage class for tissue information. |
| TissueSelectionHelper | Searches TissueCuration to return a CuratedTissue. |
| TissueSummary | |
| TIWeb_JDBCImpl | Provides access to human mRNA tissue information. |
| Exception Summary | |
| ColumnIdentifierLengthException | Thrown when the column identifier is greater than 30 characters. |
| TissueInfoNotAvailableException | |
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