edu.mssm.crover.tools.blast.parsers.xml.v3
Class Parameters

java.lang.Object
  |
  +--edu.mssm.crover.tools.blast.parsers.xml.v3.ParametersType
        |
        +--edu.mssm.crover.tools.blast.parsers.xml.v3.Parameters
All Implemented Interfaces:
java.io.Serializable

public class Parameters
extends ParametersType
implements java.io.Serializable

Version:
$Revision$ $Date$
See Also:
Serialized Form

Constructor Summary
Parameters()
           
 
Method Summary
 boolean isValid()
           
 void marshal(org.xml.sax.DocumentHandler handler)
           
 void marshal(java.io.Writer out)
           
static Parameters unmarshal(java.io.Reader reader)
           
 void validate()
           
 
Methods inherited from class edu.mssm.crover.tools.blast.parsers.xml.v3.ParametersType
deleteParameters_ScMatch, deleteParameters_ScMismatch, getParameters_Expect, getParameters_Filter, getParameters_GapExtend, getParameters_GapOpen, getParameters_Matrix, getParameters_ScMatch, getParameters_ScMismatch, hasParameters_Expect, hasParameters_GapExtend, hasParameters_GapOpen, hasParameters_ScMatch, hasParameters_ScMismatch, setParameters_Expect, setParameters_Filter, setParameters_GapExtend, setParameters_GapOpen, setParameters_Matrix, setParameters_ScMatch, setParameters_ScMismatch
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

Parameters

public Parameters()
Method Detail

isValid

public boolean isValid()
Overrides:
isValid in class ParametersType

marshal

public void marshal(java.io.Writer out)
             throws org.exolab.castor.xml.MarshalException,
                    org.exolab.castor.xml.ValidationException
Specified by:
marshal in class ParametersType
Parameters:
out -
org.exolab.castor.xml.MarshalException
org.exolab.castor.xml.ValidationException

marshal

public void marshal(org.xml.sax.DocumentHandler handler)
             throws org.exolab.castor.xml.MarshalException,
                    org.exolab.castor.xml.ValidationException
Specified by:
marshal in class ParametersType
Parameters:
handler -
org.exolab.castor.xml.MarshalException
org.exolab.castor.xml.ValidationException

unmarshal

public static Parameters unmarshal(java.io.Reader reader)
                            throws org.exolab.castor.xml.MarshalException,
                                   org.exolab.castor.xml.ValidationException
Parameters:
reader -
org.exolab.castor.xml.MarshalException
org.exolab.castor.xml.ValidationException

validate

public void validate()
              throws org.exolab.castor.xml.ValidationException
Overrides:
validate in class ParametersType
org.exolab.castor.xml.ValidationException


Copyright @ 2003 Mount Sinai School of Medicine. All Rights Reserved.