edu.mssm.crover.tools.blast.parsers.xml.v2
Class Parser

java.lang.Object
  |
  +--edu.mssm.crover.tools.blast.parsers.xml.v2.Parser

public class Parser
extends java.lang.Object


Constructor Summary
Parser()
           
 
Method Summary
static void main(java.lang.String[] args)
           
 BlastOutput parse(java.io.File xml_source)
          Parses BLAST XML output.
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

Parser

public Parser()
Method Detail

parse

public BlastOutput parse(java.io.File xml_source)
                  throws java.io.FileNotFoundException,
                         UnsupportedFormat
Parses BLAST XML output. Returns a memory representation of the result.

Throws:
java.io.FileNotFoundException - Thrown when xml_source cannot be found.
UnsupportedFormat - Thrown when xml_source cannot be validated by the NCBI DTD.

main

public static void main(java.lang.String[] args)


Copyright @ 2003 Mount Sinai School of Medicine. All Rights Reserved.