edu.mssm.crover.tools.blast.parsers.xml.v2
Class Iteration_HitsType

java.lang.Object
  |
  +--edu.mssm.crover.tools.blast.parsers.xml.v2.Iteration_HitsType
All Implemented Interfaces:
java.io.Serializable
Direct Known Subclasses:
Iteration_Hits

public abstract class Iteration_HitsType
extends java.lang.Object
implements java.io.Serializable

Version:
$Revision: 1.1 $ $Date: 2003/11/19 18:34:55 $
See Also:
Serialized Form

Constructor Summary
Iteration_HitsType()
           
 
Method Summary
 void addHit(Hit vHit)
           
 void addHit(int index, Hit vHit)
           
 void clearHit()
           
 java.util.Enumeration enumerateHit()
           
 Hit[] getHit()
           
 Hit getHit(int index)
           
 int getHitCount()
           
 boolean isValid()
           
abstract  void marshal(org.xml.sax.DocumentHandler handler)
           
abstract  void marshal(java.io.Writer out)
           
 boolean removeHit(Hit vHit)
           
 void setHit(Hit[] hitArray)
           
 void setHit(int index, Hit vHit)
           
 void validate()
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

Iteration_HitsType

public Iteration_HitsType()
Method Detail

addHit

public void addHit(Hit vHit)
            throws java.lang.IndexOutOfBoundsException
Parameters:
vHit -
java.lang.IndexOutOfBoundsException

addHit

public void addHit(int index,
                   Hit vHit)
            throws java.lang.IndexOutOfBoundsException
Parameters:
index -
vHit -
java.lang.IndexOutOfBoundsException

clearHit

public void clearHit()

enumerateHit

public java.util.Enumeration enumerateHit()

getHit

public Hit getHit(int index)
           throws java.lang.IndexOutOfBoundsException
Parameters:
index -
java.lang.IndexOutOfBoundsException

getHit

public Hit[] getHit()

getHitCount

public int getHitCount()

isValid

public boolean isValid()

marshal

public abstract void marshal(java.io.Writer out)
                      throws org.exolab.castor.xml.MarshalException,
                             org.exolab.castor.xml.ValidationException
Parameters:
out -
org.exolab.castor.xml.MarshalException
org.exolab.castor.xml.ValidationException

marshal

public abstract void marshal(org.xml.sax.DocumentHandler handler)
                      throws org.exolab.castor.xml.MarshalException,
                             org.exolab.castor.xml.ValidationException
Parameters:
handler -
org.exolab.castor.xml.MarshalException
org.exolab.castor.xml.ValidationException

removeHit

public boolean removeHit(Hit vHit)
Parameters:
vHit -

setHit

public void setHit(int index,
                   Hit vHit)
            throws java.lang.IndexOutOfBoundsException
Parameters:
index -
vHit -
java.lang.IndexOutOfBoundsException

setHit

public void setHit(Hit[] hitArray)
Parameters:
hitArray -

validate

public void validate()
              throws org.exolab.castor.xml.ValidationException
org.exolab.castor.xml.ValidationException


Copyright @ 2003 Mount Sinai School of Medicine. All Rights Reserved.