edu.mssm.crover.ssedit
Class SSSequenceRange

java.lang.Object
  |
  +--edu.mssm.crover.ssedit.SSSequenceRange

All Implemented Interfaces:

SequenceRange

public class SSSequenceRange

extends java.lang.Object

implements SequenceRange

Interface to the limits of a range of residues. Abstract the range from the various representations it can be embedded in.

See Also:

(for range stored in secondary structure annotations), (for range stored in trans-membrane annotations)

Constructor Summary

SSSequenceRange(SecondaryStructure_Annotation ssa, int index)

Method Summary

int	getEnd() Get the index of the last residue of the range.
int	getStart() Get the index of the first residue of the range.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SSSequenceRange

public SSSequenceRange(SecondaryStructure_Annotation ssa,
                       int index)

Method Detail

getStart

public int getStart()

Get the index of the first residue of the range.

Specified by:

getStart in interface SequenceRange

Returns:

Index of the first residue of the range, starts at zero.

getEnd

public int getEnd()

Get the index of the last residue of the range.

Specified by:

getEnd in interface SequenceRange

Returns:

Index of the last residue of the range, starts at zero.