edu.mssm.crover.domain2d.rbdg.xml
Class ResidueShape

java.lang.Object
  |
  +--edu.mssm.crover.domain2d.rbdg.xml.ResidueShape

All Implemented Interfaces:

java.io.Serializable

public class ResidueShape

extends java.lang.Object

implements java.io.Serializable

Determines how individual residues will be rendered. Attributes determine when and what type of shape is used to render a residue. When can be either linked or nothing. "linked" selects residues that are hyperlinked. "other" select all the other residues. Three shapes are supported: rectangular, circular, and octogonal.

Version:

$Revision$ $Date$

See Also:

Serialized Form

Constructor Summary

ResidueShape()

Method Summary

java.lang.String	getShape()
java.lang.String	getWhen()
boolean	isValid()
void	marshal(org.xml.sax.DocumentHandler handler)
void	marshal(java.io.Writer out)
void	setShape(java.lang.String shape)
void	setWhen(java.lang.String when)
static ResidueShape	unmarshal(java.io.Reader reader)
void	validate()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ResidueShape

public ResidueShape()

Method Detail

getShape

public java.lang.String getShape()

getWhen

public java.lang.String getWhen()

isValid

public boolean isValid()

marshal

public void marshal(java.io.Writer out)
             throws org.exolab.castor.xml.MarshalException,
                    org.exolab.castor.xml.ValidationException

Parameters:

out -

org.exolab.castor.xml.MarshalException

org.exolab.castor.xml.ValidationException

marshal

public void marshal(org.xml.sax.DocumentHandler handler)
             throws org.exolab.castor.xml.MarshalException,
                    org.exolab.castor.xml.ValidationException

Parameters:

handler -

org.exolab.castor.xml.MarshalException

org.exolab.castor.xml.ValidationException

setShape

public void setShape(java.lang.String shape)

Parameters:

shape -

setWhen

public void setWhen(java.lang.String when)

Parameters:

when -

unmarshal

public static ResidueShape unmarshal(java.io.Reader reader)
                              throws org.exolab.castor.xml.MarshalException,
                                     org.exolab.castor.xml.ValidationException

Parameters:

reader -

org.exolab.castor.xml.MarshalException

org.exolab.castor.xml.ValidationException

validate

public void validate()
              throws org.exolab.castor.xml.ValidationException

org.exolab.castor.xml.ValidationException