edu.mssm.crover.domain2d.rbdg.xml
Class DisulfideBridge

java.lang.Object
  |
  +--edu.mssm.crover.domain2d.rbdg.xml.DisulfideBridge

All Implemented Interfaces:

java.io.Serializable

public class DisulfideBridge

extends java.lang.Object

implements java.io.Serializable

Describes a disulfide bridge. A yellow line is drawn on the diagram between the to and from residues.

Version:

$Revision$ $Date$

See Also:

Serialized Form

Constructor Summary

DisulfideBridge()

Method Summary

int	getFrom()
int	getTo()
boolean	hasFrom()
boolean	hasTo()
boolean	isValid()
void	marshal(org.xml.sax.DocumentHandler handler)
void	marshal(java.io.Writer out)
void	setFrom(int from)
void	setTo(int to)
static DisulfideBridge	unmarshal(java.io.Reader reader)
void	validate()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

DisulfideBridge

public DisulfideBridge()

Method Detail

getFrom

public int getFrom()

getTo

public int getTo()

hasFrom

public boolean hasFrom()

hasTo

public boolean hasTo()

isValid

public boolean isValid()

marshal

public void marshal(java.io.Writer out)
             throws org.exolab.castor.xml.MarshalException,
                    org.exolab.castor.xml.ValidationException

Parameters:

out -

org.exolab.castor.xml.MarshalException

org.exolab.castor.xml.ValidationException

marshal

public void marshal(org.xml.sax.DocumentHandler handler)
             throws org.exolab.castor.xml.MarshalException,
                    org.exolab.castor.xml.ValidationException

Parameters:

handler -

org.exolab.castor.xml.MarshalException

org.exolab.castor.xml.ValidationException

setFrom

public void setFrom(int from)

Parameters:

from -

setTo

public void setTo(int to)

Parameters:

to -

unmarshal

public static DisulfideBridge unmarshal(java.io.Reader reader)
                                 throws org.exolab.castor.xml.MarshalException,
                                        org.exolab.castor.xml.ValidationException

Parameters:

reader -

org.exolab.castor.xml.MarshalException

org.exolab.castor.xml.ValidationException

validate

public void validate()
              throws org.exolab.castor.xml.ValidationException

org.exolab.castor.xml.ValidationException